Packaging research artefacts with RO-Crate

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Packaging research artefacts with RO-Crate

@id ./
name [?] Packaging research artefacts with RO-Crate
@type Dataset
description [?] This is the RO-Crate for the article about RO-Crate, submitted to Data Science. The manuscript is included in HTML and PDF versions. Additionally this crate adds the latest RO-Crate specifications and known RO-Crate implementations.
datePublished [?] 2021-08-13T14:00:00Z
author [?]
abstract [?] An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications. However, scientific articles may be ambiguous, incomplete and difficult to process by automated systems. In this paper we introduce RO-Crate, an open, community-driven, and lightweight approach to packaging research artefacts along with their metadata in a machine readable manner. RO-Crate is based on Schema.org annotations in JSON-LD, aiming to establish best practices to formally describe metadata in an accessible and practical way for their use in a wide variety of situations. An RO-Crate is a structured archive of all the items that contributed to a research outcome, including their identifiers, provenance, relations and annotations. As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences. By applying “just enough” Linked Data standards, RO-Crate simplifies the process of making research outputs FAIR while also contributes to enhancing research reproducibility.
contributor [?]
encoding [?]
hasPart [?]
identifier [?] https://doi.org/10.5281/zenodo.5146227
keywords [?] Research Object, Linked Data, Scholarly Communication, Data publishing, Data packaging, FAIR, Metadata, Reproducibility
license [?] Creative Commons Attribution 4.0 International
mentions [?] RO-Crate Community
publisher [?] ResearchObject.org
url [?] https://www.researchobject.org/2021-packaging-research-artefacts-with-ro-crate/
Items that reference this one
about [?] ro-crate-metadata.json


Go to: Stian Soiland-Reyes



Go to: Peter Sefton



Go to: Mercè Crosas



Go to: Leyla Jael Castro



Go to: Frederik Coppens



Go to: José María Fernández



Go to: Daniel Garijo



Go to: Björn Grüning



Go to: Marco La Rosa



Go to: Simone Leo



Go to: Eoghan Ó Carragáin



Go to: Marc Portier



Go to: Ana Trisovic



Go to: RO-Crate Community



Go to: Paul Groth



Go to: Carole Goble



Contributions by Stian Soiland-Reyes



Contributions by Peter Sefton



Contributions by Mercè Crosas

@id #role-0000-0003-1304-1939
name [?] Contributions by Mercè Crosas
@type Role
additionalType [?]
contributor [?] Mercè Crosas
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by LJ Garcia Castro

@id #role-0000-0003-3986-0510
name [?] Contributions by LJ Garcia Castro
@type Role
additionalType [?]
contributor [?] https://orcid.org/0000-0003-3986-0510
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Frederik Coppens

@id #role-0000-0001-6565-5145
name [?] Contributions by Frederik Coppens
@type Role
additionalType [?]
contributor [?] Frederik Coppens
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by José María Fernández

@id #role-0000-0002-4806-5140
name [?] Contributions by José María Fernández
@type Role
additionalType [?]
contributor [?] José María Fernández
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Daniel Garijo

@id #role-0000-0003-0454-7145
name [?] Contributions by Daniel Garijo
@type Role
additionalType [?]
contributor [?] Daniel Garijo
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Björn Grüning

@id #role-0000-0002-3079-6586
name [?] Contributions by Björn Grüning
@type Role
additionalType [?] writing review and editing role
contributor [?] https://orcid.org/0000-0002-3079-6586
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Marco La Rosa

@id #role-0000-0001-5383-6993
name [?] Contributions by Marco La Rosa
@type Role
additionalType [?]
contributor [?] Marco La Rosa
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Simone Leo

@id #role-0000-0001-8271-5429
name [?] Contributions by Simone Leo
@type Role
additionalType [?]
contributor [?] Simone Leo
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Eoghan Ó Carragáin

@id #role-0000-0001-8131-2150
name [?] Contributions by Eoghan Ó Carragáin
@type Role
additionalType [?]
contributor [?] Eoghan Ó Carragáin
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Marc Portier

@id #role-0000-0002-9648-6484
name [?] Contributions by Marc Portier
@type Role
additionalType [?]
contributor [?] Marc Portier
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Ana Trisovic

@id #role-0000-0003-1991-0533
name [?] Contributions by Ana Trisovic
@type Role
additionalType [?]
contributor [?] Ana Trisovic
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by RO-Crate Community

@id #role-community
name [?] Contributions by RO-Crate Community
@type Role
additionalType [?]
contributor [?] RO-Crate Community
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Paul Groth

@id #role-0000-0003-0183-6910
name [?] Contributions by Paul Groth
@type Role
additionalType [?]
contributor [?] Paul Groth
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Carole Goble



Contributions by Finn Bacall

@id #role-0000-0002-0048-3300
name [?] Contributions by Finn Bacall
@type Role
additionalType [?]
contributor [?] Finn Bacall
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Herbert Van de Sompel

@id #role-0000-0002-0715-6126
name [?] Contributions by Herbert Van de Sompel
@type Role
additionalType [?]
contributor [?] Herbert Van de Sompel
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Ignacio Eguinoa

@id #role-0000-0002-6190-122X
name [?] Contributions by Ignacio Eguinoa
@type Role
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contributor [?] Ignacio Eguinoa
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Nick Juty

@id #role-0000-0002-2036-8350
name [?] Contributions by Nick Juty
@type Role
additionalType [?]
contributor [?] Nick Juty
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Oscar Corcho

@id #role-0000-0002-9260-0753
name [?] Contributions by Oscar Corcho
@type Role
additionalType [?] writing review and editing role
contributor [?] Oscar Corcho
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Stuart Owen

@id #role-0000-0003-2130-0865
name [?] Contributions by Stuart Owen
@type Role
additionalType [?] writing review and editing role
contributor [?] Stuart Owen
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


Contributions by Laura Rodríguez-Navas

@id #role-0000-0003-4929-1219
name [?] Contributions by Laura Rodríguez-Navas
@type Role
additionalType [?]
contributor [?] Laura Rodríguez-Navas
Items that reference this one
contributor [?] Packaging research artefacts with RO-Crate


⬇️ Download: Packaging research artefacts with RO-Crate (HTML)

@id manuscript.html
name [?] Packaging research artefacts with RO-Crate (HTML)
@type
  • File
  • ScholarlyArticle
description [?] HTML manuscript of the RO-Crate article
author [?]
abstract [?] An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications. However, scientific articles may be ambiguous, incomplete and difficult to process by automated systems. In this paper we introduce RO-Crate, an open, community-driven, and lightweight approach to packaging research artefacts along with their metadata in a machine readable manner. RO-Crate is based on Schema.org annotations in JSON-LD, aiming to establish best practices to formally describe metadata in an accessible and practical way for their use in a wide variety of situations. An RO-Crate is a structured archive of all the items that contributed to a research outcome, including their identifiers, provenance, relations and annotations. As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences. By applying “just enough” Linked Data standards, RO-Crate simplifies the process of making research outputs FAIR while also contributes to enhancing research reproducibility.
url [?] https://stain.github.io/ro-crate-paper/
Items that reference this one
encoding [?] Packaging research artefacts with RO-Crate
hasPart [?] Packaging research artefacts with RO-Crate


⬇️ Download: Packaging research artefacts with RO-Crate (PDF)

@id manuscript.pdf
name [?] Packaging research artefacts with RO-Crate (PDF)
@type
  • File
  • ScholarlyArticle
description [?] PDF manuscript of the RO-Crate article
author [?]
abstract [?] An increasing number of researchers support reproducibility by including pointers to and descriptions of datasets, software and methods in their publications. However, scientific articles may be ambiguous, incomplete and difficult to process by automated systems. In this paper we introduce RO-Crate, an open, community-driven, and lightweight approach to packaging research artefacts along with their metadata in a machine readable manner. RO-Crate is based on Schema.org annotations in JSON-LD, aiming to establish best practices to formally describe metadata in an accessible and practical way for their use in a wide variety of situations. An RO-Crate is a structured archive of all the items that contributed to a research outcome, including their identifiers, provenance, relations and annotations. As a general purpose packaging approach for data and their metadata, RO-Crate is used across multiple areas, including bioinformatics, digital humanities and regulatory sciences. By applying “just enough” Linked Data standards, RO-Crate simplifies the process of making research outputs FAIR while also contributes to enhancing research reproducibility.
url [?] https://stain.github.io/ro-crate-paper/manuscript.pdf
Items that reference this one
encoding [?] Packaging research artefacts with RO-Crate
hasPart [?] Packaging research artefacts with RO-Crate


Go to: RO-Crate Metadata Specification 1.1.1



RO-Crate Software (Table 1)

@id software/
name [?] RO-Crate Software (Table 1)
@type Dataset
description [?] Applications and libraries implementing RO-Crate, targeting different types of users across multiple programming languages. creativeWorkStatus is indicative as assessed by this work (Alpha < Beta < Release Candidate (RC) < Release)
hasPart [?]
Items that reference this one
hasPart [?] Packaging research artefacts with RO-Crate


Go to: Research Object Crate (RO-Crate) website

@id https://w3id.org/ro/crate/
name [?] Research Object Crate (RO-Crate) website
@type WebSite
url [?] https://www.researchobject.org/ro-crate/
Items that reference this one
hasPart [?] Packaging research artefacts with RO-Crate


Go to: Creative Commons Attribution 4.0 International

@id https://spdx.org/licenses/CC-BY-4.0
name [?] Creative Commons Attribution 4.0 International
@type CreativeWork
identifier [?] CC-BY-4.0
url [?] https://creativecommons.org/licenses/by/4.0/
version [?] 4.0
Items that reference this one
license [?] Packaging research artefacts with RO-Crate


Go to: ResearchObject.org

@id https://www.researchobject.org/
name [?] ResearchObject.org
@type Organization
url [?] https://www.researchobject.org/
Items that reference this one
publisher [?] Packaging research artefacts with RO-Crate
parentOrganization [?] RO-Crate Community